Showing posts with label cellular senescence. Show all posts
Showing posts with label cellular senescence. Show all posts

Lipids and Cellular Senescence



Mitochondrial dysfunction, increased lipid peroxidation and altered catabolism will affect the cellular lipidome during cell senescence. Alterations in lipid metabolism and the generation of oxidised lipids may be beneficial for the senescent program during the early stages of senescence induction, possibly through modulating inflammatory and immune responses (Lawrence et al. 2002; van Diepen et al. 2013; Yaqoob 2003). However, if senescent cells persist in tissues, changes in lipid composition can result in cell dysfunction, altered rates of fatty acid oxidation that can induce inflammation and increased lipid peroxidation that can promote damage to neighbouring cells. These factors may contribute to ageing and age-related diseases. Research focused on altered lipid metabolism during cellular senescence, particularly regarding mitochondrial lipids, is in its infancy. However, in recent years, several studies have made progress in evaluating the senescent lipidome of fibroblasts.

One group investigated the alterations in a number of metabolites associated with the extracellular metabolome of fibroblasts induced to senesce via proliferative exhaustion or via γ-irradiation (James et al. 2015). They reported that a number of fatty acids and their precursors such as eicosapentaenoate, malonate, 7-alpha-hydroxy-3-oxo-4-cholestenoate and 1-stearoylglycerophosphoinositol were elevated during fibroblast senescence when compared with proliferating and quiescent cells, whereas linoleate, dihomo-linoleate, 10-heptadecenoate were depleted. Also amongst the secretory lipidome from senescent fibroblasts was an accumulation of monohydroxy fatty acids (2-hydroxypalmitate, 2-hydroxystearate, 3-hydroxydecanoate, 3-hydroxyoctanoate) and a phospholipid catabolite (glycerophosphorylcholine). It was suggested that whilst some of these changes may be due to oxidative stress, other observed increases may be a response to increased biomass commonly observed amongst senescent cells.

Maeda et al. (2009) investigated the regulation of fatty acid synthesis and ∆9-desaturation during cell senescence in human fibroblasts (Maeda et al. 2009). They found that the levels of fatty acid synthase and stearoyl-CoA desaturase-1 were decreased in senescent fibroblasts compared to proliferating fibroblasts, consequently leading to a decrease in monounsaturated fatty acids. In addition, reduced de novo synthesis of phospholipids with an associated increase in the formation of cholesterol in senescent cells was also observed and exogenous fatty acids were shown to be preferentially incorporated into the triacylglycerol pool of senescent cells.

In another study, the metabolic alterations associated with oncogene-induced senescence (OIS), using Ras-induced senescent human fibroblasts as a model were investigated (Quijano et al. 2012). Through the profiling of ~300 different intracellular metabolites, these authors showed that cells that have undergone OIS develop a metabolic signature which is distinct from cells which have undergone replicative senescence in response to extended in vitro cell culture. In the latter, a switch towards glycolysis has been observed that precedes the onset of senescence (Bittles and Harper 1984). In OIS, an increase in certain intracellular long chain fatty acids, including eicosanoate, dihomo-linoleate, mead acid and docosadienoate were observed. This altered metabolome was shown to associate with a decline in lipid synthesis and increases in fatty acid oxidation. Interestingly, the pro-inflammatory activity of the senescent secretome was reduced by inhibition of carnitine palmitoyltransferase 1, the rate limiting step in mitochondrial fatty acid oxidation, suggesting that alterations in lipid metabolism during OIS may play a role in regulating the pro-inflammatory senescent secretome. Although the mechanism underlying the increase in fatty acid levels during OIS were not fully explored, it may be due to promyelocytic leukemia (PML) activation of the fatty acid oxidation pathway through PPAR signalling (Aird and Zhang 2014). The differences between replicative senescence and OIS are intriguing; they may relate to the physiological need in preventing cancer to switch away from glycolysis as a rapid source of energy that is harnessed by cancer cells to enable them to proliferate rapidly versus the increasing insulin resistance that is seen in ageing and which associates with impaired oxidative metabolism (Burkart et al. 2016). However, while this and other studies have indicated an increase in glucose uptake during OIS, a number of other studies have observed either no change or a significant decrease in glucose uptake. This may relate to the timing of senescence induction, the cell type or the oncogene responsible.

A further study compared global lipid profiles and associated mRNA levels of proliferating and replicative senescent BJ fibroblasts; 19 specific polyunsaturated triacylglycerol species were identified as undergoing significant changes in lipid composition during cell senescence (Lizardo et al. 2017). In addition, significant changes in the expression of genes involved in specific lipid-related pathways, including glycerolipid metabolism, glycerophospholipid metabolism, unsaturated fatty acid synthesis and sphingolipid metabolism were observed during cell senescence. Based on these lipidomic and transcriptomic analysis, the authors postulated that activation of CD36-mediated fatty acid uptake and alteration to glycerolipid biosynthesis may contribute to the accumulation of triacylglycerols during cell senescence. It was suggested that these changes may be a mechanism to prevent lipotoxicity during elevated oxidative stress conditions during cell senescence.

In addition to an altered lipidome during cellular senescence, elevated ROS, likely from uncoupled mitochondria, can promote lipid peroxidation which potentiates cellular damage at distant sites. For example, stable aldehydes can diffuse from their site of generation and form adducts at distant locations, thereby propagating the responses and injury initiated by ROS (Ramana et al. 2013), including the induction of cell senescence in neighbouring cells. Flor and Kron observed an accumulation of lipid-derived aldehydes such as 4-hydroxy-2-nonenal (4-HNE) during accelerated senescence (Flor and Kron 2016). Whereas, the treatment of cells with either 4-HNE or low (5 Gy) γ-irradiation only generated low levels of cell senescence, combining both 4-HNE and 5 Gy γ-irradiation significantly elevated the senescence response. Furthermore, the use of the aldehyde-sequestering drug hydralazine blocked cell senescence induction by 25 Gy and etoposide treatment, demonstrating the potential importance of lipid peroxidation during therapy-induced senescence (Flor et al. 2016). Despite the highly damaging and pro-ageing potential of senescence-derived lipid peroxidation, little research has been conducted in this area and this requires further study.

Research on cell senescence has primarily been undertaken on fibroblasts and more research is required to explore whether the same phenomena are observed in cell-types linked to age-related disease such as in senescent adipocytes, pancreatic beta cells, renal proximal tubular epithelial cells and vascular endothelial cells. Whilst different types of senescent cells may share similarities in lipid metabolism, there may also be differences that are cell type-dependent or due to the mechanism of senescence induction and these require further study to better assess the role of altered lipid metabolism during ageing and disease. Finally, an important question to contemplate is whether the alterations in ROS, lipid metabolism and mitochondrial lipids observed during ageing and diseases are due solely to the presence of senescent cells or whether lipidomic changes can occur in absence of senescent cell accumulation.

"Cell Senescence" verses "Cell Ageing": What is the Difference?


First published @ Senescent CELL blog


In recent times, scientific findings on cellular senescence have made headlines.  The majority of these highly publicized articles are concerned with the potential health benefits of removing senescent cells from our bodies. Destroying senescent cells in mice can reverse aspects of ageing and prevent side effects in response to chemotherapy.  

In an attempt to simplify the term "cell senescence" for public consumption, the media incorrectly use words such as "old", "aged" and "elderly" to describe such cells.  This is understandable since "senescence" means "to grow old". 

The term "senescence" regarding cells was first used over fifty years ago to describe cells that could no longer proliferate after extended time in culture. Without our current understandings, this inability to proliferate was thought to be due to processes related to cell ageing and so such cells were labelled as "senescent".  Although now inaccurate, this labeling is still in use today.

So what is the difference between cell "ageing" and cell "senescence"?

Cell ageing results from the accumulation of random damage leading to impairment in cell function with time.  Cell ageing may result from the build up of damage to cellular lipids (i.e. peroxidation), damage to proteins leading to altered protein folding and aggregation, damage to the mitochondria resulting in abnormal metabolic processes and changes (epigenetic) to DNA causing alterations in gene expression.

In contrast to cell ageing, cell senescence is a programmed change in cell state often initiated by persistent damage to DNA.  

Although the initial factors which trigger DNA damage in cells may itself be random, the accompanying cellular changes associated with cell senescence are not random.  In an orchestrated response, cells permanently stop dividing, they secrete molecules that can attract immune cells and express immune proteins on their cell surface.  As such, cell senescence can be considered as a mechanism to eliminate unwanted cells by the immune system.

Part of the reason why senescent cells stay in our bodies and promote ageing may be due to a failure in the ability of an aged immune system to kill senescent cells.  The molecules that were once beneficial in attracting immune cells now become destructive over time.



Further scientific evidence demonstrating that senescent cells are not "aged" cells but rather a programmed change in cell state, comes from studies on embryonic development.  

Two back to back publications in Cell from 2013 demonstrated that the change in cell state associated with senescent cells may be beneficial during embryonic development.  If this indeed the case, it is highly unlikely that such cells suddenly become "aged" or "old" to carry out their function.  Embryonic development is highly a regulated process.  What is more likely is that such senescent cells are indeed programmed and like programmed cell death (apoptosis), play an important role in tissue remodeling during embryonic development. 

Telomere shortening: adding further to the confusion



The vast majority of the early studies on cell senescence were focused on cells which stopped dividing after extended proliferation in culture.  This was later shown to be due to telomere shortening.

Every time a cell divides it loses a portion of DNA at the end of its chromosomes called telomeres- long repeats of non-coding DNA. Telomeres protect the ends of our DNA, but when they become too short, they can no longer perform this task. This causes the cell to recognize unprotected DNA-ends as damage. A result of this DNA damage signal is induction of cell senescence.  

Throughout our lives, cells divide and our telomeres gradually become shorter. There have been numerous studies investigating the correlation between telomere length and chronological age.  In parallel to telomere shortening, gradual random alterations associated with cell ageing will also occur.

This relationship between age, telomere length and cell senescence is likely another explanation for why senescent cells are often thought of as "aged" or "old" cells.  But even in this instance, cell senescence does not occur gradually over time like ageing cells, but suddenly in response to a very short telomere. 

There is little or no evidence suggesting that telomere shortening per se causes ageing.  Cells likely function perfectly well with progressively shorter telomeres.  Problems only arise when a telomere eventually becomes too short. As such, telomere shortening increases our risk of age-related conditions as cells are more likely to become senescent.  

Drugs which could extend the length of telomeres by activating an enzyme called telomerase (which adds lost telomeres back to DNA) could prevent cells from becoming senescent and help prevent ageing.  

In summary, cell ageing can be considered as a unprogrammed, random process leading to a gradual decline in cell function.  Cell ageing is detrimental to the function of normal biological processes.  Cell senescence can be induced randomly, but is a programmed change in cell state that can occur independent of age. Cell senescence can be both detrimental and beneficial depending on the biological context.  


Targeting Cellular Senescence: One Drug for Many Diseases?

Cellular senescence is an altered cell state associated with permanent cell cycle arrest and an immunogenic, pro-inflammatory secretome that can contribute to the development and progression of age-related diseases.  Because cellular senescence can occur in different cell types (i.e. pancreatic beta cells, vascular smooth muscle cells, astrocytes) that undertake different biological functions, then their appearance can manifest differently and we refer to these manifestations as different diseases.  These include, diabetes, cardiovascular disease, COPD and cancer.  The mechanisms by which senescent cells can cause disease include:

        (1)  Loss of cellular regenerative capacity.  
        (2) Loss of normal cell function.  
        (3) Persistent pro-inflammatory tissue damage.
        (4) Altering the behaviour of neighbouring cells.
        (5) Protease-mediated degradation of extracellular structural proteins.

Although scientists researching cell senescence have long suspected that senescent cells play an important role in ageing and age-related disease, convincing evidence had not been provided until 2011 when Scientists from the Mayo Clinic in the US published their findings on the elimination of senescent cells in mice.  The elimination of senescent cells using transgenic (genetically engineered) mice delayed the onset of disease, thereby increasing healthspan.  However, likely owing to the use of an accelerated ageing mouse model, no life extension was observed in this instance.  However, a follow-up study by the same group using naturally aged mice lead to delayed tumorigenesis and reduced age-related decline leading to significant increase (up to 35%) in lifespan.  Studies like these thus provide a convincing rationale for developing therapeutic approaches for targeting senescent cells, so-called “senotherapeutics”.  These may include:

  1.        Specifically inducing cell death in senescent cells (i.e. small-molecule compounds).
  2.        Inhibiting the senescent secretome (i.e. inhibitors of inflammation).
  3.        Preventing senescence induction (i.e. telomerase activators, geroprotectors).
  4.        Boost immune response towards senescent cells (i.e. immunotherapy).


A few recent studies have published findings regarding the elimination of senescent cells by small-molecule compounds.  Wang et al (2016) identified the compound ABT-263 as a potent inducer of cell death in senescent cells leading to rejuvenation of aged tissue stem cells.  In another study, Yosef et al (2016) identified ABT-737 which through the elimination of senescent cells from the epidermis of the skin of mice lead to increased hair-follicle stem cell proliferation.  Both ABT-263 and ABT-737 inhibit proteins (BCL-2 family) known to play a role in cell survival.

Studies focused on the elimination of senescent cells are only beginning to emerge and will no doubt gain momentum as they show tremendous potential for improving health and wellbeing.  One intriguing notion that may arise from this research is concerned with the question of whether it may one day be possible to treat many diseases with a single drug.  If senescent cells play a role in the development of many different diseases, then a drug that can eliminate senescent cells in all cell types could act as both a preventative and a treatment for many diseases.

One of the obstacles preventing research into senotherapeutics from advancing and ultimately becoming translational to help increase healthspan of individuals within the general public, is funding.  However, this has not discouraged some researchers who were determined enough to acquire funding through the help of crowdfunding.  The Major Mouse Testing Programme (MMTP) raised over $50,000 towards research focused on eliminating senescent cells and is still ongoing (Click Here). 

A new start-up company, CellAge (click here) is also interested in targeting senescent cells and has recently announced a crowdfunding campaign (click here) to raise funds for their ongoing research.  CellAge aims are to “Increase human healthspan and reduce the incidence of age-related diseases by helping the human body eliminate senescent cells.  Our breakthrough technology concept harvests the promise of synthetic biology and recent findings in ageing research to deliver novel products and therapies to enable people to live healthier longer lives”

So if you are interested in stimulating research in this field for the benefit of all, then please make a donation (link here).


NKG2D ligands mediate immunosurveillance of senescent cells

Abstract

Cellular senescence is a stress response mechanism that limits tumorigenesis and tissue damage. Induction of cellular senescence commonly coincides with an immunogenic phenotype that promotes self-elimination by components of the immune system, thereby facilitating tumor suppression and limiting excess fibrosis during wound repair. The mechanisms by which senescent cells regulate their immune surveillance are not completely understood. Here we show that ligands of an activating Natural Killer (NK) cell receptor (NKG2D), MICA and ULBP2 are consistently up-regulated following induction of replicative senescence, oncogene-induced senescence and DNA damage - induced senescence. MICA and ULBP2 proteins are necessary for efficient NK-mediated cytotoxicity towards senescent fibroblasts. The mechanisms regulating the initial expression of NKG2D ligands in senescent cells are dependent on a DNA damage response, whilst continuous expression of these ligands is regulated by the ERK signaling pathway. In liver fibrosis, the accumulation of senescent activated stellate cells is increased in mice lacking NKG2D receptor leading to increased fibrosis.  Overall, our results provide new insights into the mechanisms regulating the expression of immune ligands in senescent cells and reveal the importance of NKG2D receptor-ligand interaction in protecting against liver fibrosis.



Atypical senescent states: TGFβ-induced senescence and Developmentally programmed senescence

TGFβ-induced senescence: A growing body of evidence suggests that the members of the transforming growth factor beta (TGF- β) family can induce a senescence-like state. Experimentally, senescence has been predominantly, but not exclusively, characterized by the presence of senescence-associated beta galactosidase (SA-β-Gal) staining and the up-regulation of cyclin dependent kinase inhibitors (CDKi) (see below). Human prostate basal cells treated with TGF-β1/2/3 show increased SA-β-Gal activity, which is associated with the flattened, and enlarged cell morphology typical of adherent senescent cells in vitro (Untergasser et al. 2003). Similarly TGF-β1 has been reported to induce a senescent state in bone marrow mesenchymal stem cells as a result of increased mitochondria ROS production (Wu et al. 2014). These cells also showed SA-β-Gal staining and an increased expression of p16. Yu et al. (2010) demonstrated that TGF-β2 could induce a senescent-like state in human trabecular meshwork cells. Again, this was associated with SA-β-Gal staining, increased levels of p16 at both the message and protein level and a reduction in the level of pRB protein. No impact on p21 mRNA or protein expression was observed in response to TGF-β2 exposure. Other groups have also reported a role for TGF-β signaling in inducing a senescent state (Senturk et al. 2010, Minagawa et al. 2011, Acosta et al. 2013). 

It is generally accepted that SA-β-Gal staining should be used in conjunction with several other senescent markers, as it does not appear to detect senescent cells specifically (Severino et al, 2000). However, other than the expression of CDKi, it appears that the phenotypes of cells induced to enter senescence by exposure to TGF-βs have been poorly characterized, especially in regard to immunogenic conversion. Some cell types that become senescent via this route may be cleared by the immune system in a manner analogous to those undergoing developmentally programmed senescence. Others may not and this area represents a fruitful field for further investigation.

Developmentally programmed senescence: Cells sharing features of senescence have been reported within the mesonephros and the endolymphatic sac of the inner ear in human and mouse embryos; as well as the neural roof plate and apical ectodermal ridge in rodents (Munoz-Espin et al. 2013, Storer et al. 2013). The authors hypothesize that this “developmental senescence” (DS) is a programmed part of normal embryonic development. DS was demonstrated experimentally by the presence of SA-β-Gal activity and senescence associated heterochromatin (Munoz-Espin et al. 2013). These cells seem to lack detectable DNA damage and appear to have become senescent independent of p53 and p16 and have gene expression patterns that significantly overlap with those of IMR90 fibroblasts in a state of oncogene-induced senescence. Arrest in this instance is dependent instead upon p21, regulated via the TGF-β/SMAD and PI3K/FOXO pathways (thus showing some affinity with other TGF-β induced senescent states). Interestingly, DS cells are removed during normal embryonic development by macrophages in a manner related to immune clearance of senescent cells in the mature organism (or by apoptosis should senescence fail) contributing to the formation of normal tissue architecture. Thus, the long-recognized distinction between programmed cell death in development and apoptosis in the mature organism appears to be mirrored in DS. Given that the expression of p21 in developing embryos is often attributed to ‘terminal differentiation’ (Vasey et al. 2011), it will be interesting to determine how many of these p21 positive cells are senescent cells and have undergone immunogenic conversion.

Taken from: Cellular Senescence: From Growth Arrest to Immunogenic Conversion

Physiological impact of cell senescence in vivo: Tumour suppression

While the history of research on cell senescence counts for more than half a century, only in the last 10 years the functional relevance of cell senescence in vivo was established. The irreversible cell cycle arrest in OIS cells makes it an ideal mechanism to prevent tumour formation following oncogene activation, and in the first functional in vivo studies, cell senescence was established as a tumour suppressor mechanism.  OIS has been shown to be important for preventing lymphoma development and contribute to response to therapy. Using transgenic mice models to bypass the senescence response to oncogenic N-Ras resulted in the development of invasive T-cell lymphomas, whereas control mice only develop non-lymphoid neoplasia at a much later time point.     Another mouse model using inducible K-ras was used to make pre-malignant lesions that can develop into malignant tumours in lung and pancreas.  In these models,  biomarkers  of  cell  senescence  were  predominantly  identified  in  the  pre- malignant lesions but were lost once tumours developed.  To investigate OIS in vivo, a number of studies have focused on human nevi (moles), which are benign tumours of melanocytes that frequently harbor oncogenic mutations of BRAF.  The congenital nevi stained positive for markers of OIS, but not DNA damage in this instance.  BrafE600V, which is present in the nevi, induced p16(INK4a) expression in growth-arrested melanocytes both in vitro and in situ.  In contrast, another study in premalignant melanocytic lesions did show the presence of DNA damage foci, primarily located at telomeric regions as well as the p16(INK4a) expression.  In addition to activating mutations in oncogenes, cell senescence can be induced as a result of loss of tumor suppressor Pten in the prostate. Therefore, these combined studies clearly demonstrate that cell senescence acts as a potent tumor suppressor mechanism that prevents the development of multiple malignancies.

The main focus of ageing research is to prevent/combat age-related disease and disability, allowing everyone to live healthier lives for longer.